Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq67 86.0 2e-11 >seq67 Length=277217 Score = 86.0 bits (94), Expect = 2e-11 Identities = 126/177 (71%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 |||||| | || || ||||| | |||||| || |||||| | || |||||||| Sbjct 72416 CAGCTTTGCAGAACGGCTAGTGGGCTTTGCTTGTGTGGAAGGAATCCACTTCAGCGGCAG 72475 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 || || |||||||||||| | || ||||| ||| | |||| ||||| || || || | Sbjct 72476 TTTCTGC-TCCATCTTCTGGCTTAAGAAGCGAGGATTGATGCCAGGTCTCACATTCAGCA 72534 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 | || ||||||| |||| || || |||||| ||||| || || | || |||| Sbjct 72535 ATGAGTTGATCAGCAGGGATGAAGGCTTGCATACAGACTTTGCATGCTTGCTGTACA 72591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588322222674265