Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq350 93.3 5e-14 >seq350 Length=149706 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 |||||||| || || || || || || |||| | || ||| | || ||||| || Sbjct 132456 TCAAAACGTCCTGGTCGCAGCAGAGCAGCATCCAAGACATCAGGTCTGTTGGTGGCAGCC 132397 Query 11513 ATAACCACAATG---CCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 | ||||||| ||||| | |||||||||||||| || || || | || || Sbjct 132396 AG---CACAATGACTCCAGTGTTGCCCTCAAAGCCATCCATTTCTGTCAGCAGCTGGTTG 132340 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTGCGTTGCTTGCCCA 11627 || || || || | ||||||||| || || ||| ||||||| || || |||||| Sbjct 132339 ATGGTCTGCTCACGCTCATCATT-GCCACCAC-CCATGCCAGCACCACGCTGTCTGCCCA 132282 Query 11628 CCGCATCAATCTCATCAATGAAGACAATACATGG 11661 | ||||||||||||||||||||||| || ||||| Sbjct 132281 CAGCATCAATCTCATCAATGAAGACGATGCATGG 132248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026685279200