Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq67 89.7 6e-13 >seq67 Length=277217 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/244 (69%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 59891 TCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGC 59949 |||||||| ||||| | || || || | || || || || || ||||||||||||| Sbjct 72338 TCTGTTCCAAGCCATTCACACAGTGCCATGT-GTGAAGCACAAGGCGGAATGGGCCATGC 72396 Query 59950 AGTGGATGAGTCCTGGAGCATCA--TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||||| | | | |||| || |||||| |||| || | | ||||| || ||||| Sbjct 72397 GTTGGATTGG--CAGCAGCACCAGCTTTGCAGAACGGCTAGTGGGCTTTGCTTGTGTGGA 72454 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 ||||||| |||| ||| ||||| | || |||||||| || ||||| || | || Sbjct 72455 AGGAATCCACTTCAGCGGCAGTTTCTGCTCCATCTTCTGGCTTAAGAAGCGAGGATTGAT 72514 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127 ||| || || | ||| ||| ||| |||| | |||| || ||| | ||| || || Sbjct 72515 GCCAGGTCTCACATTCAGCAATGAGTTGATCAGCAGGGATGAAGGCTTGCATACAGACTT 72574 Query 60128 TGCA 60131 |||| Sbjct 72575 TGCA 72578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520158108880