Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq17 756 0.0 seq26 643 1e-179 seq7 430 2e-115 seq41 298 7e-76 seq295 201 1e-46 >seq17 Length=65237 Score = 756 bits (838), Expect = 0.0 Identities = 1493/2184 (68%), Gaps = 45/2184 (2%) Strand=Plus/Minus Query 184981 AACAAAATTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTG 185040 ||| || ||||||| |||| || | | | || | || || || ||| || | | || Sbjct 41976 AACTAAGTTTCCAAGTTTTAGCCAGGGTCTTGCTAAAGACCCAACTACTCGGCGGATTTG 41917 Query 185041 GTATGGATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTT 185100 ||| || | || ||||| ||||| ||||| ||||||||||||||||| ||||| || | Sbjct 41916 GTACGGGATCGCCACTGCTCATGATTTTGAAAGTCATGACAATATGACTGAAGAAAATCT 41857 Query 185101 ATATCAAAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGG----G 185156 || ||||| | |||||| | || ||||| || | |||||||| ||| ||||| | Sbjct 41856 TTACCAAAAGATTTTTGCTTCTCATTTTGGACAATTAGCAATTATTTTTTTATGGACAAG 41797 Query 185157 TTGCAGGTAATTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACC 185216 || || | ||| | ||| | || ||||||||||| ||| ||| | | || | Sbjct 41796 TT-CAC-TCCTTT--TCCATGTTGCTTGGCAAGGTAATTTTCCACAATGGGGTCGTGATC 41741 Query 185217 CACAACATGTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAA 185276 | | ||||| | ||| || || || || ||||||||||| ||||| ||| |||| Sbjct 41740 CTCTTCATGTAAGACCAATTGCTCACGCTATTTGGGATCCTCACTTTGGCCAACCTGCAG 41681 Query 185277 CAGATGCATACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGT 185336 || || | || | | || || || ||||| || | | |||||| | | Sbjct 41680 TTGAAGCTTTTACTCGTGGGGGCGCTTCTGGGCCTGTAAATATCTCTACTTCTGGTGTTT 41621 Query 185337 ATCATTGGTGGTACACAGTTGGTATGAGAACTAATATGCAAC-TGTATACTGGTGGTGCA 185395 |||| |||||||| || |||| ||| | | |||| ||| | |||| | || ||| Sbjct 41620 ATCAATGGTGGTATACTATTGGAATGCGCAGTAAT---CAAGATTTATA-TAACGGAGCA 41565 Query 185396 TTTATGATTCTACTAGCATTGGTATCTTTACTTGGTGCTCAAT---TACATCTGAAACCA 185452 || | || | || | | | | ||| ||| |||| || | ||| | ||||| Sbjct 41564 GTTTTTCTTATTCTTGGTTCTGCACTTTTTCTTTTTGCTGGATGGCTTCATTTACAACCA 41505 Query 185453 AAGTTTGCACCTAAGCTTG-CTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCT 185511 || || ||| | ||| ||||||||||| || ||| | ||||| |||||||| Sbjct 41504 AAATTCCAACC-ATCTTTGTCTTGGTTTAAAAATGCAGAGTCTCGTTTAAACCATCATCT 41446 Query 185512 ATCAGTTCTATTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAAT 185571 | | | |||||| ||| | | || ||| |||| ||| | | || ||||| || Sbjct 41445 TGCTGGATTGTTTGGAACTAGTAGTTTAGCTTGGACTGGACATCTAGTTCATGTAGCTAT 41386 Query 185572 ACCTGCATCAAGAGGA-ATCACTGTAGATTGGACTAATTATGTG---TTTATGAAACCTC 185627 |||| || | || | ||| | | | ||| ||||| | | | || |||| Sbjct 41385 TCCTGAGTCTCGTGGTGAGCACGTTCGTTGGGA-TAATTTCTTAACTTCTTTG---CCTC 41330 Query 185628 ATCCTGCAGGTTTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTG 185687 |||| ||| ||| ||||||||||| || ||||||| | ||||||||| ||||| | Sbjct 41329 ATCCCCAAGGATTAACCCCATTCTTTACTGGTAACTGGGCAGCTTATGCACAGAATCCAG 41270 Query 185688 ATGGATTAAATCAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCA 185747 || ||| || | || | | || || || ||||| ||||| ||||| || Sbjct 41269 ATTCTGCAAACCATGTGTTTGCAAGTAGTGAAGGCTCAGGAACTGCAATCTTAACTTTTT 41210 Query 185748 TGGGTGGTTTCCATCCACAAA--CAGAGGCATTATGGTTGACTGATATAGCACATCATCA 185805 | ||||| || ||||| |||| || || | || |||| || ||||| ||||| ||||| Sbjct 41209 TAGGTGGATTTCATCCGCAAAGCCAAAGTCTTT--GGTTAACGGATATTGCACACCATCA 41152 Query 185806 CCTTGCAATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTAT 185865 | || || | ||| | |||||| | || || |||||||| | | | || ||||| Sbjct 41151 TTTAGCTATTGCAGTTGTTTTCATTTTAGCTGGGCATATGTACCGTACTAATTTTGGTAT 41092 Query 185866 TGGTCACTCAATGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGC 185925 ||||||| ||| ||||| ||||| ||||| || || ||| || || || ||||| Sbjct 41091 TGGTCACAGCATGCGAGAGATTCTTGATGCACACACTCCTCCAGCTGGTGGTCTTGGTGC 41032 Query 185926 AGGTCATAAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGC 185985 || ||||||||||||| ||| ||| ||| | || ||||| | || ||||| | || Sbjct 41031 TGGACATAAAGGATTATTTGATACACTTAACAATTCTTTACATTTCCAATTAGGATTAGC 40972 Query 185986 ACTTGCATCTCTAGGTGTTGTTACTAGTC--TGGTGGCACAACATATGTACTCAATGCCA 186043 |||||| | || ||| | || || ||||||||||||||||||| | | ||| Sbjct 40971 TCTTGCAGCACTTGGTACAAT--CTTATCATTGGTGGCACAACATATGTATGCGCTCCCA 40914 Query 186044 TCCTATGCTTTCATAGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAA 186103 | || ||||| | ||||| | ||| | |||||| | || ||| |||||||| Sbjct 40913 CCATACGCTTTTCTTGCACAAGATTTTACCGCACAAGCTTCGCTTTATACACATCATCAG 40854 Query 186104 TACATTGCAACTGCTCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGA 186163 || |||||| | | | ||| |||||||||||| ||||| ||||| |||||| ||||| Sbjct 40853 TATATTGCAGGTTTTATCATGTGTGGTGCTTTTGCTCATGGTGCAATCTTTTTTATTAGA 40794 Query 186164 GACTTTGATCCTACTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAA 186223 || | ||| || | || || | ||||| || | | | || | || ||||| Sbjct 40793 GATTATGACTCTGAACAAAACAAAGGAAATGTACTAGCGCGCCTATTAGATCATAAAGAG 40734 Query 186224 GCAATTATAAGTCACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATC 186283 || | || ||| ||||| ||||| | || | || || || |||||||| | Sbjct 40733 GCTGTGATTTCTCATTTAAGCTGGGTTAGTTTGTTTTTAGGTTTTCACACTTTAGGGCTT 40674 Query 186284 TATGTCCATAATGATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAA 186343 ||||| |||||||| || | || || || |||||| | ||| || ||||||||| Sbjct 40673 TATGTACATAATGACGTTATGCAAGCTTTCGGGACTCCTGAAAAACAAATCTTAATTGAA 40614 Query 186344 CCTATATTTGCACAGTGGATACAGGCAGCATCAGGTAAGATGATGTATGGATTAAGTTTC 186403 ||| | |||||||| ||||| || || ||| ||| || | ||||| || | | Sbjct 40613 CCTGTTTTTGCACAATGGATTCAAGCTGCACAAGGGAAAGCTCTTTATGGTTTTGATCTT 40554 Query 186404 TTACTATCTGATCCAAATAGTGCTGCAAGTCTAGC-AG-CAGAGAGTATGCCTGGTAATC 186461 ||| ||||| | || || | || | || || || | |||| || || Sbjct 40553 TTATTATCTTCAACCAACAGCCCAGCGTTTTCTGCTAGTCAAGGTTTATGGCT-----TC 40499 Query 186462 ATTACTGGATGAGTGCTATGAATGATCA-AACAAA-CAGTCTGTTTCTACCAATAGGACC 186519 | ||| | || ||| || | | ||||| || || |||||| | || || || Sbjct 40498 CTGGTTGGTTAGATGGTATTAACAACAACAACAATTCA--CTTTTTCTAACCATTGGGCC 40441 Query 186520 TGCTGATTTATTAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCT 186579 | |||||| | |||| ||||||||||| ||||| | ||||| || |||||||| || Sbjct 40440 AGGTGATTTTCTTATTCACCATGCTATTGCTCTTGGGCTTCATACAACCACTTTAATTCT 40381 Query 186580 AGTCAAGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGG 186639 ||| || ||||| |||||||| |||| ||||| || || |||||||| |||||||| || Sbjct 40380 AGTAAAAGGTGCTCTAGATGCTCGAGGCTCAAAGCTTATGCCAGATAAAAAAGATTTTGG 40321 Query 186640 ATATTCATTCCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGA 186699 || |||||||||||||| ||||| | || ||||||||||| | ||| |||||||| Sbjct 40320 TTACAGCTTCCCTTGTGATGGGCCAGGTCGTGGAGGTACTTGTGACATTTCAGGTTGGGA 40261 Query 186700 TGCTTTCTATCTCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTG 186759 |||||| ||||| | || || ||| || || || |||| ||| | |||||||| Sbjct 40260 TGCTTTTTATCTTGCAGTCTTTTGGATGTTAAACACGATAGGTTGGACTACATTTTATTG 40201 Query 186760 GCACTGGAAGAACCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAAC 186819 ||||||||| | |||| ||||||||||||| | ||||| ||| ||| ||| Sbjct 40200 GCACTGGAAACATCTTGGGGTTTGGCAAGGTAATGTGAACCAATTTAATGAATCCTCAAC 40141 Query 186820 ATATCTTATGGGTTGGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGG 186879 ||| ||||||||||||| |||||||| || ||| || | | | |||| || Sbjct 40140 TTATATTATGGGTTGGTTAAGAGATTACCTTTGGTTAAACTCATCTCAACTTATCAACGG 40081 Query 186880 GTACACACCATTTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCA 186939 || | |||||||||||||| | | | ||||||||||| |||| || |||||||| || Sbjct 40080 ATATAACCCATTTGGTATGAACAGTTTATCTGTATGGGCTTGGACATTTTTGTTTGGACA 40021 Query 186940 TTTAGTTTGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTT 186999 | |||||||| ||||| || ||||| | || || ||| ||||||| |||||||| | Sbjct 40020 CCTTGTTTGGGCTACAGGTTTCATGTTTTTAATCTCATGGCGAGGTTACTGGCAAGAACT 39961 Query 187000 AATTGAGACTCTTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAG 187059 ||||| |||||||| ||||| ||||| ||| || ||||||| | | | ||||||| Sbjct 39960 TATTGAAACTCTTGCATGGGCTCATCAGCAAACACCTTTAGCAAACTTTGTACGTTGGAG 39901 Query 187060 AGATAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGC 187119 ||| |||||||| || ||||||||||| |||||| | |||| |||||| ||||||| | Sbjct 39900 AGACAAACCAGTTGCTCTTTCTATTGTACAAGCACGTTTAGTAGGTTTAGCACATTTCTC 39841 Query 187120 CATAGGATTTGTGCTTACCTATGC 187143 | |||| | | |||||||||| Sbjct 39840 TGTTGGATATATCTTTACCTATGC 39817 >seq26 Length=15232 Score = 643 bits (712), Expect = 1e-179 Identities = 743/992 (75%), Gaps = 14/992 (1%) Strand=Plus/Plus Query 189665 TTCTGTGAGTGGGTAACATCAACAAACAATAGAATCTATGTTGGTTGGTTTGGTGTACTC 189724 || |||||||||||||| ||||| | || | ||||| |||||||||||||||| | Sbjct 1237 TTTTGTGAGTGGGTAACTTCAACTGAAAACCGTATCTACATTGGTTGGTTTGGTGTTTTA 1296 Query 189725 ATGATTCCATGCT-TGCTCGCAGCAGCAGCATGCTTCGTTGTTGCATTTATTGCAGCACC 189783 ||||| || | || | | | ||| || | || || |||||||| | ||||| || Sbjct 1297 ATGATCCC-TACTCTTTTAACTGCAACAACTGTGTTTATTATTGCATTTGTAGCAGCTCC 1355 Query 189784 ACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTATGGTAACAA 189843 ||||| ||||| || || || | |||||||| | ||||| || | || || ||||| Sbjct 1356 TCCTGTGGACATCGACGGTATTCGTGAGCCAGTGTCTGGTTCCCTGTTGTACGGAAACAA 1415 Query 189844 CATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTTCTACCCAAT 189903 ||| || |||||||||||||| ||| | |||||||| |||||| |||||||||||||||| Sbjct 1416 CATTATCTCTGGTGCTGTTGTTCCTACTTCAAATGCAATTGGTTTACACTTCTACCCAAT 1475 Query 189904 CTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCAGTTGGTAAT 189963 |||||||||||| | ||||||||||| | ||||| |||||||||||||| || || | Sbjct 1476 CTGGGAAGCAGCTTCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAATTAGTTGT 1535 Query 189964 CTTCCAC--TTCCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAATTATCATAC 190021 | |||| || |||| |||| | || |||||||| | | ||||| | || | | Sbjct 1536 ATGCCACTTTTTCTTAGGTGTATGT-TGC-TACATGGGGCGTGAATGGGAGCTTTCTTTC 1593 Query 190022 AGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTT 190081 | |||||||| | |||||||| ||| ||||| || |||||||| | || || | Sbjct 1594 CGTTTAGGTATGCGCCCTTGGATTGCTGTAGCTTACTCTGCACCAGTTGCAGCTGCTACT 1653 Query 190082 GCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGT 190141 || || ||| || | ||||| | ||||| || || || ||| |||||||| |||||| Sbjct 1654 GCTGTGTTCATTATCTACCCTATCGGTCAAGGGTCTTTTAGTGACGGTATGCCCTTAGGT 1713 Query 190142 ATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCTTATGCAC 190201 ||||||||||| || ||||| ||| ||||||||||||| || || || ||| | |||||| Sbjct 1714 ATCTCAGGTACTTTTAACTTTATGATTGTATTCCAAGCTGAGCACAACATCTTAATGCAC 1773 Query 190202 CCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGCAATGCAT 190261 || ||||| ||| |||||| |||||| | |||||||| | | |||||||| |||||| Sbjct 1774 CCTTTCCACATGTTAGGTGTTGCAGGTGTATTTGGTGGTTCTCTTTTCTCTGCTATGCAT 1833 Query 190262 GGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCA--CAG--AA 190317 |||||| | ||||| || || ||||| | |||||||||| ||| || | | || Sbjct 1834 GGTTCATTAGTAACTTCATCATTAATCCGTGAAACAACTG----AGAACCAATCTGCTAA 1889 Query 190318 CTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCTGCTCATGGTTA 190377 | | |||||||| || || |||||||||||||| |||||||| || ||||| || ||||| Sbjct 1890 CGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATTGTTGCTGCGCACGGTTA 1949 Query 190378 CTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTTTACACTTCTT 190437 |||||| | | || ||||| || ||||| |||||||||||| | |||||||||||| Sbjct 1950 CTTTGGGCGTTTGATTTTCCAATACGCTTCTTTCAACAACTCACGTTCTTTACACTTCTT 2009 Query 190438 CTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATTTGCACAATGGC 190497 |||||| | || || ||| | | ||||| || | | ||||| | || ||||| Sbjct 2010 CTTAGCTGCATGGCCAGTAGTAGGGATCTGGTTTACTGCTTTAGGTATATCAACTATGGC 2069 Query 190498 ATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTAAAATTGT 190557 ||| ||| |||| ||||||||||||||||| || || || || | |||||| | | Sbjct 2070 ATTTAACCTAAACGGTTTCAACTTTAACCAATCAGTTGTAGACTCTCAAGGTCGTGTAAT 2129 Query 190558 TCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAAAG 190617 | ||||||| || || | ||| | || ||||| |||||||| |||||||| ||| | Sbjct 2130 TAACACATGGGCTGACATTATCAACCGTGCTAACCTAGGTATGGAGGTAATGCACGAACG 2189 Query 190618 AAATGCACACAACTTCCCACTAGACCTAGCTT 190649 || || |||||||||||||| ||| |||||| Sbjct 2190 TAACGCTCACAACTTCCCACTTGACTTAGCTT 2221 >seq7 Length=22195 Score = 430 bits (476), Expect = 2e-115 Identities = 721/1045 (69%), Gaps = 21/1045 (2%) Strand=Plus/Plus Query 190790 GGTTGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGG 190849 |||||||||||| | ||||| ||| || || || | ||||| || |||||||| Sbjct 4105 GGTTGGTTTGATACAGTAGATGATTGGGTACGCCGCGACCGTTTTGTTTTTGTAGGTTGG 4164 Query 190850 TCTGGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACT 190909 || ||| | || | || || || | || | | ||||| ||||| || || | | Sbjct 4165 TCAGGTTTATTACTCTTTCCTACAGCATATCTTGCTTTAGGTGGATGGTTAACTGGGATT 4224 Query 190910 ACATTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAAC 190969 || ||||| ||| ||||||||| || || | ||| || | ||| ||||| || Sbjct 4225 ACTTTTGTAACTTCTTGGTATACTCACGGTTTAGCAACTAGTTTCCTAGAAGGTTGTAAT 4284 Query 190970 TTTTTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTA 191029 || || || || ||||| || || || | | |||||||||| |||||| || | Sbjct 4285 TTCTTAACTGCTGCAGTTTCAACTCCAGCAAACAGTATGGGTCATTCTTTATTGTTTCTT 4344 Query 191030 TGGGGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAAC 191089 ||||| ||||| || ||| | ||| ||||||||| ||| | || || |||||| Sbjct 4345 TGGGGACCAGAAGCTCAATCTGATTTTACTCGTTGGTTTCAATTAGGCGGGCTTTGGGCA 4404 Query 191090 TTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATT 191149 |||||||| |||||||| | |||| | | || || || |||||||| || ||||||||| Sbjct 4405 TTTGTAGCTCTTCATGGAGCTTTTGCTTTAATTGGTTTTATGTTACGCCAATTTGAAATT 4464 Query 191150 GCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTT 191209 || | | || | || | |||||||||||| |||| ||||| || || || ||| Sbjct 4465 GCTCGTTCAGTAAGACTTCGTCCTTACAATGCTATTGCGTTTTCAGCACCTATTGCTGTT 4524 Query 191210 TTCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCA 191269 || ||| || ||||| || || | |||||| ||||||| ||||| ||| Sbjct 4525 TTTGTTTCTGTTTTTTTAATTTACCCGTTAGGTCAGTCTGGTTGGTTTTTTGCTCCTAGT 4584 Query 191270 TTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACA 191329 ||||| |||| |||||||| ||| ||||| || | ||||| |||||||| || Sbjct 4585 TTTGGTATTGCTTCAATCTTTCGATTCATTCTTTTTTTCCAAGGATTCCACAACTGGACT 4644 Query 191330 CTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCC 191389 | ||||||||||||||||||||||| || ||| | |||||| || || || ||||| Sbjct 4645 TTAAACCCTTTCCACATGATGGGAGTAGCTGGTGTATTAGGTGCTGCTTTGCTTTGTGCG 4704 Query 191390 ATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGT 191449 ||||| ||||| || || | ||||| | | ||| ||||||| Sbjct 4705 ATTCACGGTGCAACTGTTGAAAACACTCTTTTTGA------------------AGATGGT 4746 Query 191450 CAAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCT 191509 | | | || || || || | |||||| | ||||| || | || ||||| || ||| Sbjct 4747 GATGGTGCAA--AC-ACTTTCCGTGCATTTAACCCAACTCAAGCAGAAGAAACGTACTCT 4803 Query 191510 ATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGA 191569 | | || || || | |||||||| || || |||||| | || || || |||||| || Sbjct 4804 TTCGTGACAGCTAATCGTTTCTGGTCTCAAATCTTTGGTGTAGCTTTTTCAAACAAACGA 4863 Query 191570 TTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGT 191629 | || ||||| || ||||| ||||| || |||| || | |||| || | ||| Sbjct 4864 TGGCTTCACTTTTTTATGTTATTTGTGCCAGTAACTGGTTTATGGATGAGTGCACTTGGT 4923 Query 191630 ATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCA 191689 |||||||| | ||| | || || |||| || ||||| ||||||||||| || | ||| Sbjct 4924 GTTGTAGGTTTAGCATTAAATCTACGAGCTTACGATTTCGTATCTCAAGAAATTCGTGCA 4983 Query 191690 GCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATG 191749 |||||||| || || ||||| || || || || || ||||||||| | || |||||||| Sbjct 4984 GCAGAAGATCCTGAATTTGAGACTTTTTACACAAAAAACATTCTTTTAAACGAAGGTATT 5043 Query 191750 AGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTT 191809 | ||||||||| || | ||| || || ||||| || |||| ||||| ||||| || Sbjct 5044 CGTGCATGGATGGCTGCTCAAGATCAGCCACATGAAAAAATTGTATTCCCTGAGGAGGTA 5103 Query 191810 CTACCTAGAGGAAATGCATTGTAAT 191834 |||| | ||||| || | |||| Sbjct 5104 TTACCACGTGGAAACGCTCTTTAAT 5128 >seq41 Length=38024 Score = 298 bits (330), Expect = 7e-76 Identities = 403/559 (72%), Gaps = 2/559 (0%) Strand=Plus/Plus Query 182850 CAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATTTTG 182909 ||||||| || || || || ||||| |||||| | || |||||||| ||||| |||| Sbjct 12292 CAAAAGGTCCATCTACTACAACTTGGATCTGGAATCTTCATGCAGATGCACATGACTTTG 12351 Query 182910 ATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTGCTC 182969 ||| ||| ||| |||||| |||||| ||| ||||| | ||| ||||||||||| | Sbjct 12352 ATAGTCATACTACTGATCTTGAAGAGATTTCTAGAAAGGTTTTTAGTGCACACTTTGGAC 12411 Query 182970 ATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTTTCAA 183029 | ||||||| |||||| | ||| | || || | | || || || || | ||||| | Sbjct 12412 AATTAGGTATTATCTTTATTTGGTTAAGTGGTATGTATTTCCACGGAGCCCGTTTTTCTA 12471 Query 183030 ACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTTTGGC 183089 ||||| || ||||| || |||||||| | ||||| |||||||||| || |||| Sbjct 12472 ACTATGAGGGTTGGTTAAGTGATCCAACTCACATTAAACCAAGTGCTCAAGTAGTATGGC 12531 Query 183090 CTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATTAGAA 183149 |||| | ||||||||||| || ||||| ||| |||| |||| |||||| ||| | Sbjct 12532 CTATTGTAGGTCAAGAGATTTTAAATGGTGATGTTGGTGGTGGATTTCAAGGGATTCAGA 12591 Query 183150 TTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAACTCAACTA- 183208 |||| || || || ||||| | ||| ||||| | ||||| || | |||| |||||| Sbjct 12592 TTACTTCCGGCTTCTTTCAACTTTGGCGAGCAGGTGGTATTACTAGTGAATTACAACTAT 12651 Query 183209 ATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGTGCATTT 183268 | | || ||| | |||| |||| ||||||| | | |||||| |||||| || Sbjct 12652 ACAGTACT-GCAATCGGTGGTTTAATTATGGCTGGTGCGATGTTTTTTGCTGGCTGGTTC 12710 Query 183269 CATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATGATGAAT 183328 |||| ||| |||||||| || ||| ||||| || ||||||||||||||| |||| Sbjct 12711 CATTATCATAAGGCTGCTCCAAAATTAGAGTGGTTCCAAAATGTAGAATCTATGTTGAAC 12770 Query 183329 CATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACATTTAATTCAT 183388 ||||||||||||||| | | || | ||| |||| |||||||| ||| ||| ||| Sbjct 12771 CATCACCTTGCAGGTCTTTTAGGGTTAGGTAGCTTAGCTTGGGCAGGTCATCAAATCCAT 12830 Query 183389 ATTTCAATCCCAACTAATA 183407 | || | || | ||||| Sbjct 12831 GTATCTTTACCGATTAATA 12849 Score = 255 bits (282), Expect = 7e-63 Identities = 673/1019 (66%), Gaps = 49/1019 (5%) Strand=Plus/Plus Query 183557 TTCTTCTCACTCAACTGGATGGCATTTACAGATTTCCTCACCTTTAAAGGTGGTTTGAAT 183616 ||||| || | ||||||| | || || || || || || ||||||||||| || ||| Sbjct 12963 TTCTTTACAGTAAACTGGAATGAATATAGTGACTTTCTAACTTTTAAAGGTGGGTTAAAT 13022 Query 183617 CCTGTAACTGGCAGTCTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTT 183676 || || ||||| || | ||| | ||||||| ||| || ||||| |||| || || ||| Sbjct 13023 CCAGTGACTGGTGGTTTATGGTTAACAGATACAGCTCACCATCATTTAGCTATTGCGGTT 13082 Query 183677 ATGTTTATCATTGCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAA 183736 | ||| | || ||||||||| ||||| || || ||||| |||||||| || ||| Sbjct 13083 CTTTTTTTAATAGCAGGTCATCAATATCGTACTAATTGGGGGATTGGTCACAGTATAAAA 13142 Query 183737 GAGATATTAGATGGTCAGAATGG----TTTCCCACAGGGTGTCACACACAGAGGATTATA 183792 ||||| ||||| | ||| || || ||| | | |||| | || || || || Sbjct 13143 GAGATTTTAGAAGCTCATAAGGGGCCCTTTACTGGTGAAGGTCATA---AGGGGCTT-TA 13198 Query 183793 TGAATTTCTAGCAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAGGATC 183852 ||| || || | || | ||||||||| || | | || | || | | || || Sbjct 13199 TGAGATTTTAACCACTTCTTGGCATGCACAATTAGCTATTAACTTAGCTCTCTTTGGCTC 13258 Query 183853 TATCAGTATCATAGTTTCACATCATATGTATGCAATGCCACCTTATCCATATCTTGGTAT 183912 | | ||| || || | ||||| |||||||||||||| ||||| || || | | | Sbjct 13259 TTTATCTATTATTGTGGCTCATCACATGTATGCAATGCCTCCTTACCCTTACTTAGCAAC 13318 Query 183913 TGAATATCCAACAGTAGTAGGATTATTCACCCATCATATGTGGATAGGTGGTTTTCTTAT 183972 ||| || || | | | ||||| || || | ||||||||||||||| ||| Sbjct 13319 TGATTACGGCACTCAACTTTCTATTTTCACTCACCACAACTGGATAGGTGGTTTTTGTAT 13378 Query 183973 TGTGGGTGCATCAGCACATGCTTCAATTGCTATGATAAGAGACTATAATCCTGTTCAACA 184032 ||| ||||| || |||| |||| |||| || | || ||| |||| |||| Sbjct 13379 TGTAGGTGCTGGGGCTCATGGAGCAATCTTTATGGTACGTGATTATGATCC-AACAAACA 13437 Query 184033 TATGGGA-AATGTATTAGATAG---AATACTTAAATCTAGAGATGCAATCATCAGTCACT 184088 | | || | |||||| | ||||| | | ||||||| || ||| ||| | Sbjct 13438 ATTACAATAACTTGTTAGATCGTGTAATACGTCA---CCGAGATGCTATTATCTCTCATT 13494 Query 184089 TGAACTGGGTATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTATATTCACAATGATA 184148 | || ||||| || ||||||||||| || || |||||||| | || || |||||||||| Sbjct 13495 TAAATTGGGTTTGTATCTTTTTAGGATTCCACAGTTTTGGGTTATACATCCACAATGATA 13554 Query 184149 TTATGAGAGCATTGGGTAGACCTAATGATCTATTCAGTGATACAGCAATACAATTACAAC 184208 | || || || ||| | ||| | ||| | ||| ||| ||||| |||||| |||||| Sbjct 13555 CATTAAGTGCGTTAGGTCGTCCTCAAGATATGTTCTCTGACACAGCTATACAACTACAAC 13614 Query 184209 CTGTATTTGCACAGTCTGTTCAGA--GATTACAT----GCTTCATTATATAATGTCTCTG 184262 |||| |||||||| | |||||| | | || | || || || | || | Sbjct 13615 CTGTTTTTGCACAATTTGTTCAAAACACTCACTTTTTAGCACCACAATTAACTGCACCAA 13674 Query 184263 ATGTATTTGGTGGATCAACCACAA--TG-------------------GTTGGTGGTAAGA 184301 ||| || | || ||| ||| || |||||||| ||| Sbjct 13675 ATGCGTTAGCAGGTACAAGTGCAACTTGGGGTGGTGATGTTGTTGCTGTTGGTGGAAAGG 13734 Query 184302 TTGCTAATGCT-CCTTTTGTACTAGGTACAGCAGACTTTATGATACATCACATACACGCT 184360 |||| |||| | ||| || | |||| || || || || ||| | |||||||| ||||| Sbjct 13735 TTGC-AATGATGCCTATTTCATTAGGAACTGCTGATTTCATGGTTCATCACATTCACGCA 13793 Query 184361 TTCCAGATTCATGTTTGTGTATTAATTCTTCTCAAGGGTGT--TTTATACTCTAGAAACT 184418 || ||||| || || ||||| | | || ||||| ||||| | | | | | Sbjct 13794 TTTACTATTCACGTAACAGTTTTAATATTGTTGAAAGGTGTGCTTTATGCAC--GTAGTT 13851 Query 184419 CACAATTAATACCAGATAAGAGTAAGTTAGGATTCAGATTCCCTTGTGATGGTCCTGGTA 184478 | | ||||| |||||||| || |||| ||| | || ||||||||||| |||||| Sbjct 13852 CTCGGTTAATCCCAGATAAAGCAAACCTAGGTTTCCGTTTTCCTTGTGATGGGCCTGGTC 13911 Query 184479 GAGGAGGCACTTGTCAGGTATCAGGATGGGATCATGTATTCCTTGGTTTATTCTGGATG 184537 |||| || || || || || || |||||||| ||||| ||| | ||| | || |||||| Sbjct 13912 GAGGCGGTACATGCCAAGTTTCTGGATGGGACCATGTGTTCTTAGGTCTTTTTTGGATG 13970 Score = 230 bits (254), Expect = 3e-55 Identities = 276/368 (75%), Gaps = 8/368 (2%) Strand=Plus/Plus Query 184604 GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTATGG 184663 ||||| |||||||| || ||| ||| ||| || ||||| ||| | | || ||||| ||| Sbjct 16707 GGAGGAAACTTTGCACAAAGTGCAAATACCATTAATGGTTGGCTTCGTGATTTCTTGTGG 16766 Query 184664 TCACAGTCAAGTCAAGTTCT-CAATAGTTATGGACAAGAC--ATCAGCATGTATGGTTTG 184720 |||||||| ||||||| | |||| |||||| | ||| |||| ||||||| Sbjct 16767 GCACAGTCATCTCAAGTTATTCAATC-TTATGGTTCTGCTTTATCTGCAT--ATGGTTTA 16823 Query 184721 CTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAGA 184780 |||| ||||| || || ||| | ||||| ||||| || |||||||| | |||||| | Sbjct 16824 ATATTCCTTGGTGCTCACTTTATTTGGGCCTTCAGCTTAATGTTCCTGTTTAGTGGTCGT 16883 Query 184781 GGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGCA 184840 ||||| |||||||| ||||| || ||||||| |||||| |||||||||||||| |||| Sbjct 16884 GGATATTGGCAAGAATTGATTGAATCTATTGTTTGGGCTCATAACAAATTAAAGGTTGCT 16943 Query 184841 CCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCACAC 184900 || | |||||||||||||| | |||||||| || ||||| || || ||||| || Sbjct 16944 CCGGCAATTCAACCAAGAGCTTTAAGTATTACACAGGGTCGTGCAGTAGGTGTTGCCCAT 17003 Query 184901 T-TCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCACCTTATCCCCTT 184959 | |||| | || ||||| || ||||| ||| ||||||| || |||| |||| | | Sbjct 17004 TATCTT-TTAGGTGGTATAGCAACAACCTGGTCATTCTTTTTAGCTCGAATTATTGCTGT 17062 Query 184960 AAGTTAAA 184967 | |||||| Sbjct 17063 AGGTTAAA 17070 >seq295 Length=4569 Score = 201 bits (222), Expect = 1e-46 Identities = 192/246 (78%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||||| || || || || || ||||| ||||| ||||| || || || ||||| ||| Sbjct 3262 ATGTCACATGCTGTAAACATTTATGAAACTTGTATTGGGTGTACTCAGTGTGTTCGTGCT 3321 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 ||||| ||||| ||||||||| | ||||||||||| ||||| |||| ||||||||| Sbjct 3322 TGTCCTACTGATGTTTTAGAAATGATACCTTGGGATGGTTGCAAGGCAAGCCAAATTGCT 3381 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || | || ||||||| ||||||||||| ||||| | |||||| |||| || ||||| Sbjct 3382 TCTGCCCCGCGAACTGAAGATTGTGTAGGTTGTAAACGTTGTGAATCAGCTTGCCCTACT 3441 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAGCA 182725 |||||||||||| | |||||||| || ||| | ||||| || |||||||||| |||| Sbjct 3442 GACTTTTTAAGTGTCCGTGTTTATTTAGGTTCCGAAACAACTCGAAGCATGGGATTAGCT 3501 Query 182726 TATTAA 182731 || ||| Sbjct 3502 TACTAA 3507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631421856547320