Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq20 96.9 7e-15
seq5 93.3 9e-14
seq603 91.5 3e-13
seq424 91.5 3e-13
seq398 91.5 3e-13
seq130 91.5 3e-13
seq58 91.5 3e-13
seq10 91.5 3e-13
seq1 91.5 3e-13
seq618 87.8 4e-12
seq441 87.8 4e-12
seq247 87.8 4e-12
seq173 87.8 4e-12
seq43 87.8 4e-12
seq33 87.8 4e-12
seq15 87.8 4e-12
seq11 87.8 4e-12
seq68 86.0 1e-11
>seq20
Length=1927901
Score = 96.9 bits (106), Expect = 7e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 165706 GCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTC 165765
||||||||| |||||||||||||||||||| || || |||| || ||||||||||||||
Sbjct 614150 GCTTGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTC 614091
Query 165766 GAGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 614090 GAGCCCCACATTGGGC 614075
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| |||||||||||||||||||| || || |||| || ||||||||||||||||||
Sbjct 528631 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 528690
Query 165770 CCCACGATGGGC 165781
||||| |||||
Sbjct 528691 CCCACATTGGGC 528702
>seq5
Length=2431615
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| |||||||||||||||||||| || || |||| || ||||||||||||||||
Sbjct 1357536 TTGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 1357595
Query 165768 GCCCCACGATGGGC 165781
||||||| |||||
Sbjct 1357596 GCCCCACATTGGGC 1357609
>seq603
Length=6670
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 137 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 78
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 77 CCCCACATTGGGC 65
>seq424
Length=8690
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 7237 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 7178
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 7177 CCCCACATTGGGC 7165
>seq398
Length=7853
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 5423 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5364
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 5363 CCCCACATTGGGC 5351
>seq130
Length=132207
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 1659 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1718
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 1719 CCCCACATTGGGC 1731
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 4999 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5058
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 5059 CCCCACATTGGGC 5071
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 14247 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14306
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 14307 CCCCACATTGGGC 14319
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||| ||||||
Sbjct 20448 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGATTCGAG 20507
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 20508 CCCCACATTGGGC 20520
>seq58
Length=829714
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 473753 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 473812
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 473813 CCCCACATTGGGC 473825
>seq10
Length=2191866
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 17102 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 17043
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 17042 CCCCACATTGGGC 17030
>seq1
Length=5981844
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 1818891 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1818950
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 1818951 CCCCACATTGGGC 1818963
>seq618
Length=6227
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || ||||||||| |||||||
Sbjct 5519 TGCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGAGTTCGAG 5578
Query 165769 CCCCACGATGGGC 165781
|||||| |||||
Sbjct 5579 CCCCACATTGGGC 5591
>seq441
Length=6258
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 1109 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1050
Query 165769 CCCCAC 165774
||||||
Sbjct 1049 CCCCAC 1044
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||| |||||| || || ||||||| |||||||||||||||||
Sbjct 3797 TGCCCGGGTAGCTCAGTCGGTCGAGCGCAAGGCTCTTAATCTTGTGGTCGTGGGTTCGAG 3738
Query 165769 CCCCAC 165774
||||||
Sbjct 3737 CCCCAC 3732
>seq247
Length=19111
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 16215 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16156
Query 165769 CCCCAC 165774
||||||
Sbjct 16155 CCCCAC 16150
>seq173
Length=46887
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 2257 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2198
Query 165769 CCCCAC 165774
||||||
Sbjct 2197 CCCCAC 2192
>seq43
Length=1130383
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 1109313 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1109372
Query 165769 CCCCAC 165774
||||||
Sbjct 1109373 CCCCAC 1109378
>seq33
Length=1491501
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 1132933 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1132992
Query 165769 CCCCAC 165774
||||||
Sbjct 1132993 CCCCAC 1132998
>seq15
Length=2063187
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 1325715 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1325656
Query 165769 CCCCAC 165774
||||||
Sbjct 1325655 CCCCAC 1325650
>seq11
Length=2108072
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||||| || || |||| || |||||||||||||||||
Sbjct 625 TGCCCGGGTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 566
Query 165769 CCCCAC 165774
||||||
Sbjct 565 CCCCAC 560
>seq68
Length=669586
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| |||||||||||||||||||| || || |||| || ||||||||||||||||||
Sbjct 159442 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 159383
Query 165770 CCCAC 165774
|||||
Sbjct 159382 CCCAC 159378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057807044734130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |