Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq77 95.1 1e-14
seq54 86.0 7e-12
>seq77
Length=584170
Score = 95.1 bits (104), Expect = 1e-14
Identities = 386/595 (65%), Gaps = 39/595 (7%)
Strand=Plus/Minus
Query 145693 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG--GATGAAGTCCCCGGGCTCGA 145750
||||||||| ||||| ||||| ||| ||| | || | ||||| ||| ||||| ||
Sbjct 431750 ACGTGGTTGGCGTAGATGTGCGTGTCGCCC--GTCGAGATGATGAGCTCCTTGGGCTTGA 431693
Query 145751 GGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG--CTGGCTATGTTGAAGGG 145808
|||||| | |||| ||||| || || | ||||| | || ||||| ||||
Sbjct 431692 GGCCCGCCTTGGCCGCGAGGATGTACGTGAGGACCGAGTACGACAGG--ATGTTCCAGGG 431635
Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC-CG 145867
| || || || |||| | ||||||||||| |||||| || | ||| | ||
Sbjct 431634 GAAGCCGAGGAACACGTCCACGCTGCGCTGGTACATGTGGCAGCTCAGGCCGCCGGCGCG 431575
Query 145868 --CCACGTAGAACTGGCACAG-GAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924
| |||||||||| | | | || ||||||||||||||| ||||| | ||||||
Sbjct 431574 GTCGGCGTAGAACTG-CGCGGAGACGTGGCAGGGCGGCAGCGCCATCTTGTCCAGGTCGC 431516
Query 145925 CCGGGTTCCAGGCGG---TGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCC 145981
|||||||||||||| ||| || | | | ||||| |||||| | | | |||
Sbjct 431515 ACGGGTTCCAGGCGGACATGAAGATGCGGCGGCTGCT---GGGGTTGCGCCGCAGCTCGT 431459
Query 145982 CTATCAGGTCCCTGAGCTGGTCCACG--CCCTGCC----------CCCGGTAATCTGTCT 146029
| | || | |||||||| ||| ||||||| |||| ||||
Sbjct 431458 CGAGCACAAACTGCAGCTGGTCGACGCCCCCTGCCTCGGCCCCCTGCCGGGGCGGCGTCT 431399
Query 146030 TGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089
|| |||||||||||| | |||||| | | ||||||| |||||| | | || | ||
Sbjct 431398 TGCAGTCCACGTACGGCGAGCCGAAGCGGCGCCACTGGTGGCCGTAGCCCGCGCCAATGT 431339
Query 146090 CCCCGGGCTC---CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGG 146146
| || ||| | ||| | ||| ||| | | | | ||| | || || | ||||
Sbjct 431338 CGCC---CTCTGGCAGGTGGCGCAGGCCGCGCGCGTCCAAGAACGCGCGCGAGCTGTTGC 431282
Query 146147 CGTCCCAGATCTTGACGCC-CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATG 146205
||||||| | ||||| | ||| | | || | | ||||||| || | |||
Sbjct 431281 CGTCCCACACGCGTACGCCGTCGCGCTGCAGGATCGCT-GCGTCCGTGTCGCCGCGCATG 431223
Query 146206 AACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCA 146260
||||| |||||||| | || |||| ||| ||| | |||||||||||||
Sbjct 431222 AACCACAGCAGCTCCTGGATGACCTTTTGCCACGCAACCTTTTTGGTGGTCAGCA 431168
>seq54
Length=968918
Score = 86.0 bits (94), Expect = 7e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835
||| ||||| | |||| || |||||||||||||| |||||||||| ||| | |||
Sbjct 433160 GGTGAGCAGAGCGTAGGATGCGATGTTGAAGGGCACTCCCAGCCCCACGTCGCAGCTGCG 433219
Query 145836 CTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTG 145880
||||||| ||||| |||||| ||| ||||||| ||||||||
Sbjct 433220 TTGGTACATGAGGCAGCTGAGCTCTCCGTCCGCCACATAGAACTG 433264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590067572674040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |