Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq48 89.7 4e-13 >seq48 Length=1037572 Score = 89.7 bits (98), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||| |||||| |||||||||||||| || |||||||| ||| || | || || Sbjct 716281 TACCAGGTGCAGTGTGCTCTCCTTCTGGATATTGTAGTCTGCCAGCGTACGCCCATCCTC 716222 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||||| || || ||||| ||||||||||| ||||||||||| Sbjct 716221 TAGTTGCTTGCCAGCGAAGATCAACCGCTGCTGGTCGGGAGG 716180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395069176461271