Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq35 127 2e-24 >seq35 Length=1396082 Score = 127 bits (140), Expect = 2e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| || || ||||| ||||| || |||||||||| || || |||||| ||||||| || Sbjct 1360639 CATGAACAGGTCCGGAATCCAAAGGCCGTAGAACAGATCACGCGCGCGCGCCTCCTCCTT 1360698 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 |||| ||||| || ||||||||| || || |||||||||||||| ||||||| ||| Sbjct 1360699 GCCGTGATTCTTGCGCAGATCCAAAAACTCGAAGACGTCCGCATGCCAGGGCTCGATGTA 1360758 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 | ||| || |||||| | ||| ||||||||| || || || Sbjct 1360759 GATGGCGAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCCACATA 1360803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445759429327920