Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 2e-15 >seq6 Length=2401260 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/139 (78%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 33580 GGCGACAAGTTTGCAT-CGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCA 33638 ||||||||||| || | | |||||| |||||||||||| |||||||| | ||| |||| Sbjct 2072215 GGCGACAAGTTCGCCTCCCGTCACGG-CCAGAAGGGCACCTGCGGCATTACCTAC-ACCA 2072272 Query 33639 -GTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATG 33697 | ||||||||| ||| | || || ||| | || |||||| | || |||||||||| | Sbjct 2072273 TGGAGGACATGCCCTTCTCCGCGGAGGGCATTGTGCCGGACATCATCGTCAACCCGCACG 2072332 Query 33698 CGTTCCCCTCGCGCATGAC 33716 | | ||||| |||||||| Sbjct 2072333 CCATTCCCTCCCGCATGAC 2072351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356228168662153