Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq35 86.0 9e-12 >seq35 Length=1396082 Score = 86.0 bits (94), Expect = 9e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||||||||||| |||||||||| || |||||||| || || || || Sbjct 1268986 CAGGCGAAGTCGCAGTGCAGCCCCTCGTCTCGGGAGATGAGTTCGTTTGAGAAGGTTAGG 1268927 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| || || || ||||| || ||| ||| || || || ||| Sbjct 1268926 CCGGGCATCAGGCCGCGTTTCTTGAGCCAGAAAATGCTGCAAAACGAGCCGCTGAAAAAG 1268867 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 || || || || || || ||||| || || | ||| Sbjct 1268866 ATACCCTCCACAGCCGCGAAGGCTACCAGCCGCTC 1268832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718257568071640