Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq35 86.0 9e-12
>seq35
Length=1396082
Score = 86.0 bits (94), Expect = 9e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| ||||| ||||||||||| |||||||||| || |||||||| || || || ||
Sbjct 1268986 CAGGCGAAGTCGCAGTGCAGCCCCTCGTCTCGGGAGATGAGTTCGTTTGAGAAGGTTAGG 1268927
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| ||||| || || || ||||| || ||| ||| || || || |||
Sbjct 1268926 CCGGGCATCAGGCCGCGTTTCTTGAGCCAGAAAATGCTGCAAAACGAGCCGCTGAAAAAG 1268867
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114
|| || || || || || ||||| || || | |||
Sbjct 1268866 ATACCCTCCACAGCCGCGAAGGCTACCAGCCGCTC 1268832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718257568071640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |