Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq35 87.8 4e-12 >seq35 Length=1396082 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTC 104514 || || || ||||||||||| ||||||||||| || | ||||| | ||| || ||||| Sbjct 1304543 CCCTCCTTGTCCTGAATCTTGGCTTTTACATTCTCAATAGTATC-CGAGGACTCGACCTC 1304485 Query 104515 TAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||||||||| || ||||| || || ||||| |||||||| Sbjct 1304484 AAGGGTAATAGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1304440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151379944882708