Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_007581.1
Length=185683
Score E
Sequences producing significant alignments: (Bits) Value
seq42 93.3 5e-14
>seq42
Length=1168175
Score = 93.3 bits (102), Expect = 5e-14
Identities = 91/112 (81%), Gaps = 4/112 (4%)
Strand=Plus/Minus
Query 114611 AACTATCCA-TACTGATAGGTAAGTCTTTGAGATTTATCTCCAACTTTTCCCCCAGT-CC 114668
|||||| || ||| |||||||||| ||||| ||||||||||| |||||||||| | ||
Sbjct 44844 AACTATTCAATACGGATAGGTAAGGATTTGA-ATTTATCTCCACCTTTTCCCCCCTTGCC 44786
Query 114669 AAACCGTACGTGCGACTTTC-ACCGCATACGGCTTTCCATCAATATATTTTA 114719
| |||||||||| ||||||| | | |||||||| |||| | |||| | |||
Sbjct 44785 ACACCGTACGTGAGACTTTCGAACTCATACGGCGTTCCCCCGATATGTATTA 44734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594048310424280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |