Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq67 98.7 1e-15
>seq67
Length=753185
Score = 98.7 bits (108), Expect = 1e-15
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||||||||||| | ||||| ||||| | ||| ||| || || |||||||| || ||
Sbjct 68651 ACCGCCGCGCAGACGCAGCACCAGATGGAGCGTGCTTTCCTTCTGGATGTTGTAGTCAGC 68710
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || |||||||||||||| |||| || ||||||||||| |||||
Sbjct 68711 CAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGG 68770
Query 64336 AATTCCT 64342
||| |||
Sbjct 68771 AATGCCT 68777
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||||| | ||||| ||||| | ||| || || || |||||||| || ||
Sbjct 68279 CCGCCGCGCAGACGCAGCACCAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 68338
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || | || || |||||||||||||| |||| || ||||||||||| || |||
Sbjct 68339 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGA 68398
Query 64337 ATTCCT 64342
|| |||
Sbjct 68399 ATGCCT 68404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499636986804440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |