Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq35 105 7e-18
>seq35
Length=1396082
Score = 105 bits (116), Expect = 7e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 94468 ATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAAC 94527
||| |||| | |||||||||||||| | || ||||| |||| ||||||||| ||||
Sbjct 1360295 ATCCTGGAGGCTCAGGTGGAGACGGGCAATCCGTACATGTTGTACAAGGACTCGTGCAAC 1360236
Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587
|| |||||||||||| |||| || |||||| | || ||||||||||||||||||
Sbjct 1360235 AAGAAATCCAACCAGCAGAACCTGGGCACTATCAAGTGTTCCAATCTGTGCACCGAGATT 1360176
Query 94588 GTCGAGTATAC 94598
| ||||| ||
Sbjct 1360175 ATTGAGTACAC 1360165
Score = 89.7 bits (98), Expect = 5e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160
|| |||||||||||||| ||||| ||| | |||||||| ||||||||||||| || ||
Sbjct 1358659 GTTGCCCCCATGCCCACAGCCTCGACGTCCCAGATCCTGGGCAACAACGAGTGCTTTGAG 1358600
Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220
|||| |||||| ||| | ||| |||| ||| | | || || || | || | |||
Sbjct 1358599 CCCTACACCTCGAACATTTACGTTCGGCGCGTGTTATCGGGCGAGTTTACTGTTGTGAAC 1358540
Query 95221 AAGCACCTCCTACGGGACCTGA 95242
||||| | || | |||||||
Sbjct 1358539 CAGCACTTGCTTCACGACCTGA 1358518
Score = 86.0 bits (94), Expect = 6e-12
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203
|| ||||||||||| || || | | | ||||| | ||||| |||| |||||||||||
Sbjct 1360803 TATGTGGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCATCTACATCGAGCCCTGG 1360744
Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263
|| |||||||| | || | || ||||| ||||| |||||||| || || | |
Sbjct 1360743 CATGCGGACGTCTTCGAGTTTTTGGATCTGCGCAAGAATCACGGCAAGGAGGAGGCGCGC 1360684
Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| | || || ||||||| || ||| | || ||||| || |||
Sbjct 1360683 GCGCGTGATCTGTTCTACGGCCTTTGGATTCCGGACCTGTTCATG 1360639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494715463765960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |