Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq35 123 4e-23 >seq35 Length=1396082 Score = 123 bits (136), Expect = 4e-23 Identities = 126/162 (78%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 || ||||| || |||||||||||||| |||||||| || ||||||| ||||| || | | Sbjct 1268992 AGCAGGCAGGCGAAGTCGCAGTGCAGCCCCTCGTCTCGGGAGATGAGTTCGTTTGAGAAG 1268933 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAA-GCACCGCT 160035 | ||||| ||||| | || || |||||||| ||||| || |||||| | ||||| Sbjct 1268932 GTTAGGCCGGGCATCAGGCCGCGTTTCTTGAGCCAGAAAAT-GCTGCAAAACGAGCCGCT 1268874 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTC 160077 |||||||| |||||||| ||||| || || || |||| ||| Sbjct 1268873 GAAAAAGATACCCTCCACAGCCGCGAAGGCTACCAGCCGCTC 1268832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795142765760560