Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq10 185 1e-41
>seq10
Length=2191866
Score = 185 bits (204), Expect = 1e-41
Identities = 205/271 (76%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 169402 TTTTGCGAGTGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTA 169461
||||| |||||| | || ||||| | ||| | | || | |||||||| ||||| |
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 169462 ATGATTCCATGCTTACTCACAGCAGCAGCATGTTTCATCGTTGCATTCATTGCAGCACCT 169521
||||| ||||| | || || ||| || || || ||| | || ||||| || || ||
Sbjct 2092312 ATGATCCCATGTCTTCTTACTGCAACATCAGTATTTATCATCGCTTTCATCGCTGCTCCG 2092253
Query 169522 CCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGTTCT-TTCTTGTATGGTAACAA 169580
|| || || ||||| || || | |||||||| | |||||| ||||| |||||||||||
Sbjct 2092252 CCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTT-TATGGTAACAA 2092194
Query 169581 CATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATCGGACTACACTTCTACCCAAT 169640
||||||| | ||||| ||||||||| | || ||||||||||| || || |||||||||||
Sbjct 2092193 CATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAAT 2092134
Query 169641 CTGGGAAGCAGCAACTGTTGATGAATGGTTG 169671
|||||||| || || | ||||| ||||||
Sbjct 2092133 TTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579203742559840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |