Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_015282.1
Length=174079
Score E
Sequences producing significant alignments: (Bits) Value
seq10 210 2e-49
seq65 87.8 2e-12
>seq10
Length=2191866
Score = 210 bits (232), Expect = 2e-49
Identities = 209/268 (78%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 163785 TTCTGCGAATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTG 163844
|| || || ||| | ||||| || | |||||||| || | ||||||||||| || |
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 163845 ATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163903
|||||||| || ||| | ||||| ||| || || ||| |||| ||| ||||||||||
Sbjct 2092312 ATGATCCCATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTCC 2092254
Query 163904 CCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAA 163963
|| || ||||||||||||||||||||||| ||| ||||||| || | |||||||||||
Sbjct 2092253 GCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACAA 2092194
Query 163964 CATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCAT 164023
||||||| | ||||| |||||||| | || || || || || || || |||||||| ||
Sbjct 2092193 CATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAAT 2092134
Query 164024 TTGGGAAGCCGCATCCCTTGATGAATGG 164051
||||||||| || || || ||||| |||
Sbjct 2092133 TTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106
>seq65
Length=794414
Score = 87.8 bits (96), Expect = 2e-12
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 164484 GCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTC 164539
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 544456 GCTGCTCATGGTTACTTTGGTCGTCTAATCTTCCAATACGCTTCATTCAACAACTC 544511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556916091088440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |