Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_015283.1
Length=176428
Score E
Sequences producing significant alignments: (Bits) Value
seq10 187 3e-42
>seq10
Length=2191866
Score = 187 bits (206), Expect = 3e-42
Identities = 190/248 (77%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 168512 ACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTAACA 168571
||| | ||| | ||||| | |||||||||||||| | |||||||||||| | | ||
Sbjct 2092351 ACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATCATGATCCCATGTCTTCTTACT 2092292
Query 168572 GCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGGAATC 168631
||| || || || || | || || || ||||| || || || || ||||| || ||
Sbjct 2092291 GCAACATCAGTATTTATCATCGCTTTCATCGCTGCTCCGCCAGTAGACATCGATGGTATT 2092232
Query 168632 AGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTT 168691
| ||||| || ||||| |||| | ||||| |||||||||||| ||||||| ||||||
Sbjct 2092231 CGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACAACATCATCACAGGTGCTGTTGTT 2092172
Query 168692 CCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGAT 168751
||| |||| ||||| ||||| || || |||||||||||||||||||| ||| | | |||
Sbjct 2092171 CCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAATTTGGGAAGCTGCTTCTCTAGAT 2092112
Query 168752 GAGTGGTT 168759
||||||||
Sbjct 2092111 GAGTGGTT 2092104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564432773544480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |