Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq10 201 1e-46 >seq10 Length=2191866 Score = 201 bits (222), Expect = 1e-46 Identities = 211/272 (78%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 167088 TTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTG 167147 ||||| || ||| | || ||| | ||||| || || ||||||||||||| || | Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313 Query 167148 ATGATCCCTACGT-TGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||||| | || | ||| | ||||| ||| || || |||||||| ||| ||| ||||| Sbjct 2092312 ATGATCCC-ATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 | || || |||||||||||||| || ||||||||| | ||||| || | |||||||||| Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 |||||||| | ||||| |||||||| ||||||| ||||| || || || ||||| || | Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTG 167357 | |||||||| || | || || ||||||||| Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560599233492400