Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq10 201 1e-46
>seq10
Length=2191866
Score = 201 bits (222), Expect = 1e-46
Identities = 211/272 (78%), Gaps = 4/272 (1%)
Strand=Plus/Minus
Query 167088 TTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTG 167147
||||| || ||| | || ||| | ||||| || || ||||||||||||| || |
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 167148 ATGATCCCTACGT-TGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||| | || | ||| | ||||| ||| || || |||||||| ||| ||| |||||
Sbjct 2092312 ATGATCCC-ATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
| || || |||||||||||||| || ||||||||| | ||||| || | ||||||||||
Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
|||||||| | ||||| |||||||| ||||||| ||||| || || || ||||| || |
Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTG 167357
| |||||||| || | || || |||||||||
Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560599233492400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |