Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq10 174 2e-38
>seq10
Length=2191866
Score = 174 bits (192), Expect = 2e-38
Identities = 189/251 (75%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353
|||||||||||| | ||||| ||||| || || | ||| | |||||||| ||||| ||
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413
||||| || || || || | || || | || ||| | || ||||||||||| ||
Sbjct 2092312 ATGATCCCATGTCTTCTTACTGCAACATCAGTATTTATCATCGCTTTCATCGCTGCTCCG 2092253
Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473
|| || || ||||| || || | || |||||| | |||||| | | ||||||||||||
Sbjct 2092252 CCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACAAC 2092193
Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533
|||||| | ||||||||||| || | ||| ||||| ||||| | || |||||||| ||
Sbjct 2092192 ATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAATT 2092133
Query 215534 TGGGAAGCAGC 215544
|||||||| ||
Sbjct 2092132 TGGGAAGCTGC 2092122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 745069948786480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |