Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq10 232 8e-56
>seq10
Length=2191866
Score = 232 bits (256), Expect = 8e-56
Identities = 216/272 (79%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 164763 tttttGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCT 164822
|||||| |||||| | ||||| || | ||||| ||||| |||||||||||||||| |
Sbjct 2092373 TTTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAAT 2092314
Query 164823 TATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTC 164881
|||||||| ||| | || | || ||| | || ||||| | || |||||||||||||
Sbjct 2092313 CATGATCCCATGTCTTCTTACTGCAACA-TCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255
Query 164882 CCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACA 164941
| || || ||||| ||||||||||||||||| || |||||||||| | || |||||||
Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195
Query 164942 ACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTA 165001
|||||||| | |||||||| ||||| |||||||||| ||||| || || ||||| || |
Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135
Query 165002 TTTGGGAAGCTGCAACCATGGATGAATGGTTG 165033
||||||||||||| | | ||||| ||||||
Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563651985754240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |