Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq10 208 9e-49 >seq10 Length=2191866 Score = 208 bits (230), Expect = 9e-49 Identities = 192/243 (79%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 169717 AACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCA 169776 |||||| | || | |||||||||||||| | |||||||||||||| | | ||| || Sbjct 2092345 AACCGCCTTTACATCGGTTGGTTCGGTGTAATCATGATCCCATGTCTTCTTACTGCAACA 2092286 Query 169777 ACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAA 169836 | |||||| | ||||||||||| ||||| || || ||||||||||| || | ||| Sbjct 2092285 TCAGTATTTATCATCGCTTTCATCGCTGCTCCGCCAGTAGACATCGATGGTATTCGTGAA 2092226 Query 169837 CCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCT 169896 || || ||||||| | | |||||||||||||||||| | ||||| ||||||||| || Sbjct 2092225 CCAGTTTCAGGTTCTCTTCTTTATGGTAACAACATCATCACAGGTGCTGTTGTTCCAACT 2092166 Query 169897 TCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGG 169956 || ||||| ||||| || || ||||| || ||||||||||| || |||||||||||||| Sbjct 2092165 TCTAACGCTATCGGCCTGCATTTCTACCCAATTTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106 Query 169957 TTG 169959 ||| Sbjct 2092105 TTG 2092103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582838885714400