Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq10 150 5e-32 >seq10 Length=2191866 Score = 150 bits (166), Expect = 5e-32 Identities = 196/271 (72%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 36687 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTC 36746 |||||||| || || | ||||||||||| ||||||||||| || || ||||| ||||| Sbjct 2092104 AACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTTA 2092163 Query 36747 GATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACA 36806 || | ||| || | || || | |||||||||||| ||||| || | | ||||| || Sbjct 2092164 GAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAACT 2092223 Query 36807 GGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCT 36866 || |||||||||||||| || || || || || ||||| | || || || | |||| || Sbjct 2092224 GGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATACT 2092283 Query 36867 GTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGG 36926 | ||| || | ||| |||||||| | ||| || ||||| || | || |||||| Sbjct 2092284 GATGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCGG 2092343 Query 36927 TTGTTTGTACTTGTAACCCAGTCACATAAAC 36957 || | || || | ||| ||||| |||| Sbjct 2092344 TTCTCAGTTGAAGTGATCCACTCACAAAAAC 2092374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150452164905854