Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_016657.1
Length=47055
Score E
Sequences producing significant alignments: (Bits) Value
seq10 150 5e-32
>seq10
Length=2191866
Score = 150 bits (166), Expect = 5e-32
Identities = 196/271 (72%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 36687 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTC 36746
|||||||| || || | ||||||||||| ||||||||||| || || ||||| |||||
Sbjct 2092104 AACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTTA 2092163
Query 36747 GATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACA 36806
|| | ||| || | || || | |||||||||||| ||||| || | | ||||| ||
Sbjct 2092164 GAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAACT 2092223
Query 36807 GGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCT 36866
|| |||||||||||||| || || || || || ||||| | || || || | |||| ||
Sbjct 2092224 GGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATACT 2092283
Query 36867 GTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGG 36926
| ||| || | ||| |||||||| | ||| || ||||| || | || ||||||
Sbjct 2092284 GATGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCGG 2092343
Query 36927 TTGTTTGTACTTGTAACCCAGTCACATAAAC 36957
|| | || || | ||| ||||| ||||
Sbjct 2092344 TTCTCAGTTGAAGTGATCCACTCACAAAAAC 2092374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150452164905854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |