Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq10 143 8e-30
>seq10
Length=2191866
Score = 143 bits (158), Expect = 8e-30
Identities = 192/267 (72%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 5911 CCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGA 5970
||| ||||| ||| || |||||||| || || ||||| || | || || ||||| ||
Sbjct 2092106 CCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTTAGA 2092165
Query 5971 GCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGG 6030
| || ||||| || |||| ||||||||||| ||||| || ||||| |||| || ||
Sbjct 2092166 AGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAACTGG 2092225
Query 6031 TTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGT 6090
|||||| || || |||||||| ||||| || ||||| | ||| || | |||||| | |
Sbjct 2092226 TTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATACTGA 2092285
Query 6091 AGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTT 6150
||||| || | || || ||||| | ||||| ||||| || | || ||||||||
Sbjct 2092286 TGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCGGTT 2092345
Query 6151 GTTGGTGCTAGTAACCCAGTCACAGAA 6177
| || ||| | ||| ||||| ||
Sbjct 2092346 CTCAGTTGAAGTGATCCACTCACAAAA 2092372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152647332294786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |