Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq67 86.0 5e-12 >seq67 Length=753185 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || |||| ||||| ||| ||||||||||| || || || ||||| |||| Sbjct 68279 CCGCCGCGCAGACGCAGCACCAGATGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGCC 68338 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| |||||| ||||| || ||||| ||||| || || | |||| Sbjct 68339 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGA 68398 Query 48660 ACGCC 48664 | ||| Sbjct 68399 ATGCC 68403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380931792011073