Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq10 203 4e-47
>seq10
Length=2191866
Score = 203 bits (224), Expect = 4e-47
Identities = 205/267 (77%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561
||| | ||| |||| ||| ||| || ||| | || |||||||||||||||| | |||
Sbjct 2092369 TGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATCATG 2092310
Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621
||||| || | || | ||| || | || ||||| || ||||| || || || |||
Sbjct 2092309 ATCCCATGTCTTCTTACTGCAACATCAGTATTTATCATCGCTTTCATCGCTGCTCCGCCA 2092250
Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681
|| || ||||||||||| | ||||| ||| ||||||| ||||| |||||||||||||||
Sbjct 2092249 GTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACAACATC 2092190
Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741
||| | |||||||| ||||| | ||| || ||||| || || || ||||| || || |||
Sbjct 2092189 ATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAATTTGG 2092130
Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTG 162768
||||| || |||| ||||||||||||
Sbjct 2092129 GAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553076151136440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |