Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq14 96.9 2e-14 >seq14 Length=2072552 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| || || || ||| |||| || || || ||||| ||||| || | |||| Sbjct 31336 ACTGTTCCAGCGTACTTCAACGATGCTCAGCGCCAGGCTACTAAGGATGCTGGGACAATT 31395 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 | || || ||||| | || || || ||||| || || || |||||| |||| ||||| Sbjct 31396 TCTGGCCTGAATGTGGTTCGCATCATCAATGAGCCGACGGCTGCCGCAATTGCCTATGGC 31455 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 31456 CTTGACAAGAA 31466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268125538540148