Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_020835.1
Length=47325
Score E
Sequences producing significant alignments: (Bits) Value
seq10 168 2e-37
>seq10
Length=2191866
Score = 168 bits (186), Expect = 2e-37
Identities = 200/271 (74%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 18549 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTA 18608
|||||||| || || | ||||||||||| ||||||||||| || || ||||| ||||||
Sbjct 2092104 AACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTTA 2092163
Query 18609 GATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACA 18668
|| | || || | || |||| ||||||||||| ||||| || | | ||||| ||
Sbjct 2092164 GAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAACT 2092223
Query 18669 GGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCT 18728
|| |||||||||||||| ||||| || || |||||||| | || || || | |||| ||
Sbjct 2092224 GGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATACT 2092283
Query 18729 GTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGG 18788
| | ||| || | ||| |||||||| | ||| || ||||| || | ||| ||||||
Sbjct 2092284 GATGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCGG 2092343
Query 18789 TTGTTTGTACTCGTAACCCAGTCACATAAAC 18819
|| | || || | ||| ||||| ||||
Sbjct 2092344 TTCTCAGTTGAAGTGATCCACTCACAAAAAC 2092374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151316152070594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |