Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq10 168 2e-37 >seq10 Length=2191866 Score = 168 bits (186), Expect = 2e-37 Identities = 200/271 (74%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 18549 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTA 18608 |||||||| || || | ||||||||||| ||||||||||| || || ||||| |||||| Sbjct 2092104 AACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTTA 2092163 Query 18609 GATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACA 18668 || | || || | || |||| ||||||||||| ||||| || | | ||||| || Sbjct 2092164 GAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAACT 2092223 Query 18669 GGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCT 18728 || |||||||||||||| ||||| || || |||||||| | || || || | |||| || Sbjct 2092224 GGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATACT 2092283 Query 18729 GTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGG 18788 | | ||| || | ||| |||||||| | ||| || ||||| || | ||| |||||| Sbjct 2092284 GATGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCGG 2092343 Query 18789 TTGTTTGTACTCGTAACCCAGTCACATAAAC 18819 || | || || | ||| ||||| |||| Sbjct 2092344 TTCTCAGTTGAAGTGATCCACTCACAAAAAC 2092374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151316152070594