Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_020838.1
Length=45728
Score E
Sequences producing significant alignments: (Bits) Value
seq10 163 8e-36
>seq10
Length=2191866
Score = 163 bits (180), Expect = 8e-36
Identities = 198/270 (73%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 22184 CAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATT 22243
|| ||| ||||| || | |||||||||||||||||||||||| || || ||||| || ||
Sbjct 2092103 CAACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTT 2092162
Query 22244 ACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGAC 22303
| | ||||| || || |||| ||||||||||||||||| | || || || | ||
Sbjct 2092163 AGAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAAC 2092222
Query 22304 GGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACA 22363
||||| || || ||||||||||| || || || || | | || ||||| |||||
Sbjct 2092223 TGGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATAC 2092282
Query 22364 AGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACG 22423
| ||| || | ||| || || || ||||| | || |||||||| || | ||||| ||
Sbjct 2092283 TGATGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCG 2092342
Query 22424 GTTATTAGTAGAGGTGACCCAGGAACAAAA 22453
||| | ||| || |||| ||| ||||||
Sbjct 2092343 GTTCTCAGTTGAAGTGATCCACTCACAAAA 2092372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146205827988780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |