Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq10 199 5e-46
>seq10
Length=2191866
Score = 199 bits (220), Expect = 5e-46
Identities = 209/272 (77%), Gaps = 2/272 (1%)
Strand=Plus/Plus
Query 27447 CAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATT 27506
|||||||||||| || || || |||||||| ||||||||||| || || ||||| || ||
Sbjct 2092103 CAACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTT 2092162
Query 27507 TGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAAC 27566
||| |||| ||||| ||||| | ||||||||||| ||||| | ||| ||||| | |||
Sbjct 2092163 AGAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAAC 2092222
Query 27567 GGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GC 27625
|||||||||||||| || || || || || || || |||||||| |||| || || |
Sbjct 2092223 TGGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATAC 2092282
Query 27626 AGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAAC 27685
|| ||||| | | || ||||||||| | ||||||||||||||| | || | |
Sbjct 2092283 TGA-TGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGC 2092341
Query 27686 GGTTGTTAGTTGATGTCACCCACTCACAGAAA 27717
|||| | |||||| || | ||||||||| |||
Sbjct 2092342 GGTTCTCAGTTGAAGTGATCCACTCACAAAAA 2092373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665483993331320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |