Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq35 113 5e-20 >seq35 Length=1396082 Score = 113 bits (124), Expect = 5e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 65066 GCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGT 65125 |||||||| | ||||| || | || || ||| ||||||||||||||| ||| ||| | Sbjct 1268821 GCTCCTTCCCGGAGCGGCTGGTAGCCTTCGCGGCTGTGGAGGGTATCTTTTTCAGCGGCT 1268880 Query 65126 CATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 | || ||| |||| ||| | ||||| || || || ||||| |||||| |||||||| Sbjct 1268881 CGTTTTGCAGCATTTTCTGGCTCAAGAAACGCGGCCTGATGCCCGGCCTAACCTTCTCAA 1268940 Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | ||||| || |||||||| ||||| || ||| Sbjct 1268941 ACGAACTCATCTCCCGAGACGAGGGGCTGCAC 1268972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596560271142880