Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq10 185 1e-41 >seq10 Length=2191866 Score = 185 bits (204), Expect = 1e-41 Identities = 205/271 (76%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 8604 CAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTT 8663 |||||||||||||| | |||||||||||||| || ||||| || | || |||||||| Sbjct 2092103 CAACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTT 2092162 Query 8664 GGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAAC 8723 |||| |||||| |||||||| | |||||||||||| ||||| | | ||||||| ||| Sbjct 2092163 AGAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAAC 2092222 Query 8724 AGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCA 8783 |||||||||||||| ||||| || || || |||||||| || || || | |||||| Sbjct 2092223 TGGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATAC 2092282 Query 8784 AGTAGCAGCAGCTAACAAG-CAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTC 8842 | | |||| ||| ||| || || ||||| | || || |||||||||| ||||| | Sbjct 2092283 TGATGTTGCAG-TAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGC 2092341 Query 8843 TGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 ||| | || || | |||||| ||||| Sbjct 2092342 GGTTCTCAGTTGAAGTGATCCACTCACAAAA 2092372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615852769451720