Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq10 167 3e-36
seq65 84.2 2e-11
>seq10
Length=2191866
Score = 167 bits (184), Expect = 3e-36
Identities = 183/241 (76%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 165796 AACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCAACT 165855
||||| || || |||||||||| ||| | ||||| ||| ||| | | |||||
Sbjct 2092345 AACCGCCTTTACATCGGTTGGTTCGGTGTAATCATGATCCCATGTCTTCTTACTGCAAC- 2092287
Query 165856 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 165914
||| | || ||| |||| |||||||||||||| || || |||||||| || || |||||
Sbjct 2092286 ATCAGTATTTATCATCGCTTTCATCGCTGCTCCGCCAGTAGACATCGATGGTATTCGTGA 2092227
Query 165915 ACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 165974
||| || | |||||||| | |||||||||||||||||| | ||||| |||||||| |
Sbjct 2092226 ACCAGTTTCAGGTTCTCTTCTTTATGGTAACAACATCATCACAGGTGCTGTTGTTCCAAC 2092167
Query 165975 TTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAATG 166034
||| ||||| || || || || ||||| || || |||||||| || || || || || ||
Sbjct 2092166 TTCTAACGCTATCGGCCTGCATTTCTACCCAATTTGGGAAGCTGCTTCTCTAGATGAGTG 2092107
Query 166035 G 166035
|
Sbjct 2092106 G 2092106
>seq65
Length=794414
Score = 84.2 bits (92), Expect = 2e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 166468 GCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTC 166523
|| |||||||||||||| |||||| | |||||||||||||||||||||||||||||
Sbjct 544456 GCTGCTCATGGTTACTTTGGTCGTCTAATCTTCCAATACGCTTCATTCAACAACTC 544511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561239223484400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |