Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq10 149 2e-31 >seq10 Length=2191866 Score = 149 bits (164), Expect = 2e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 26593 CCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGA 26652 |||||| || || | |||||||||| || ||||| ||||| || ||||| |||||||| Sbjct 2092106 CCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTTAGA 2092165 Query 26653 GGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGG 26712 | || || || || |||| || || ||||| || || | | || || |||||||| Sbjct 2092166 AGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAACTGG 2092225 Query 26713 CTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAAACATGT 26772 ||||| || ||||| || ||||| ||||| || |||||||| || | ||||| || Sbjct 2092226 TTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATACTGA 2092285 Query 26773 AGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTT 26832 || || | || | || || ||||| | || |||||||| || | || || ||||| Sbjct 2092286 TGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCGGTT 2092345 Query 26833 CTCAGTACTTGTAACCCACTCACAAAA 26859 |||||| || | |||||||||||| Sbjct 2092346 CTCAGTTGAAGTGATCCACTCACAAAA 2092372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147709805645920