Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq10 188 8e-43
>seq10
Length=2191866
Score = 188 bits (208), Expect = 8e-43
Identities = 202/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 68075 CAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTT 68134
||||||||||||||||| || |||||||| || || ||||| || || ||||| |||||
Sbjct 2092103 CAACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTT 2092162
Query 68135 TGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAAC 68194
||| | |||||||||||||| | |||||||||||||| || | || ||||||| |||
Sbjct 2092163 AGAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAAC 2092222
Query 68195 AGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCA 68254
||||| | ||||||||||| || ||||| || || || ||||| || ||||| ||
Sbjct 2092223 TGGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATAC 2092282
Query 68255 AGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCG 68314
| || ||| | || | || || ||||| | |||||||||||||| | || | |||
Sbjct 2092283 TGATGTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGCG 2092342
Query 68315 ATTGTCAACTGAGGTGACCCAGTTACA 68341
|| ||| ||| |||| ||| | |||
Sbjct 2092343 GTTCTCAGTTGAAGTGATCCACTCACA 2092369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566938334363160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |