Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq10 239 5e-58
>seq10
Length=2191866
Score = 239 bits (264), Expect = 5e-58
Identities = 217/271 (80%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 68556 CAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATT 68615
|||||||||||| || | || ||||||||||| || || || || || || || || ||
Sbjct 2092103 CAACCACTCATCTAGAGAAGCAGCTTCCCAAATTGGGTAGAAATGCAGGCCGATAGCGTT 2092162
Query 68616 TGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAAC 68675
||| | |||||||||||||| | ||||||||||||||||| ||||| ||||| | |||
Sbjct 2092163 AGAAGTTGGAACAACAGCACCTGTGATGATGTTGTTACCATAAAGAAGAGAACCTGAAAC 2092222
Query 68676 AGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-AC 68734
||||||||||||||||||||||| || || |||||||||||||| |||| ||| || ||
Sbjct 2092223 TGGTTCACGAATACCATCGATGTCTACTGGCGGAGCAGCGATGAAAGCGATGATAAATAC 2092282
Query 68735 AGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGC 68794
||| ||||| | ||| || |||||||| | || ||||||||||| | ||||||||
Sbjct 2092283 TGAT-GTTGCAGTAAGAAGACATGGGATCATGATTACACCGAACCAACCGATGTAAAGGC 2092341
Query 68795 GGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825
||||||| || ||||| | ||| || || ||
Sbjct 2092342 GGTTCTCAGTTGAAGTGATCCACTCACAAAA 2092372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572045454499320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |