Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_021221.1
Length=45781
Score E
Sequences producing significant alignments: (Bits) Value
seq36 111 5e-20
>seq36
Length=1374688
Score = 111 bits (122), Expect = 5e-20
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 1068 GTAGCGCGGCGGACGTGATCGTGCCCGCCCAAGGGCGAGCGCTGATCCCGACCGACCTGT 1127
||||||||| |||| | || | ||||| | ||| ||||| || ||| ||| | |
Sbjct 1183652 GTAGCGCGGAGGACACGGTCATCCCCGCTCGCGGGAAGGCGCTCGTCAAGACGGACATCT 1183711
Query 1128 CCTTC-GAGTTCCCGAAGGGGGTCTATGGGCGTCTCGCTCCTCGTTCGGGGCTGGCGGTG 1186
|| || | |||||| ||||| |||||| ||| | ||||| |||||||| ||||| |
Sbjct 1183712 CCATCCGCGTTCCC-AAGGGCACCTATGGACGTGTTGCTCCGCGTTCGGGCCTGGCCGCC 1183770
Query 1187 AAACACTTTATCGATGTGGGGGCGGGCGTGATAGACGGCGACTATCGAGGCATCGTGTGC 1246
|| |||| |||||| || |||||||| || |||| ||||||||||||| ||| ||
Sbjct 1183771 AAGAACTTCATCGATACTGGTGCGGGCGTCATTGACGAGGACTATCGAGGCAACGTCGGC 1183830
Query 1247 GTGCTGCTGTTTAATTTCTCAGACA 1271
|| || || || || |||||||
Sbjct 1183831 GTCCTCCTCTTCAACCATTCAGACA 1183855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146375425469266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |