Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq10 224 1e-53
>seq10
Length=2191866
Score = 224 bits (248), Expect = 1e-53
Identities = 212/268 (79%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 150839 TTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTG 150898
|||||||| ||| | || || ||| | ||||| || || |||||||||||||||| |
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 150899 ATGATTCCAACTCTGTTGGCAGCAACCATTTGC-TTCATCGTGGCATTCATCGCTGCTCC 150957
||||| ||| ||| | | ||||| || | || ||| | || ||||||||||||||
Sbjct 2092312 ATGATCCCATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTCC 2092254
Query 150958 CCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAA 151017
|| || ||||||||||| || |||||||| ||| | |||||||| | || ||||||||
Sbjct 2092253 GCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACAA 2092194
Query 151018 CATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCAT 151077
||||||| | |||||||||||||| |||||||||||||||| ||||| ||||| || ||
Sbjct 2092193 CATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAAT 2092134
Query 151078 CTGGGAAGCAGCCTCTCTCGATGAATGG 151105
|||||||| || ||||| ||||| |||
Sbjct 2092133 TTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549613805279720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |