Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq10 212 7e-50 >seq10 Length=2191866 Score = 212 bits (234), Expect = 7e-50 Identities = 211/271 (78%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 |||||||||||| | || || ||||| || ||| | ||| | |||||||| ||||| | Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313 Query 72295 ATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCT 72354 ||||||||||||||||| ||||| | | || || | || |||||||||||||| Sbjct 2092312 ATGATCCCATGTCTTCTTACTGCAACATCAGTATTTATCATCGCTTTCATCGCTGCTCCG 2092253 Query 72355 CCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACAA 72413 ||||| || ||||| || || | ||||||||| | |||||| ||||| ||||||||||| Sbjct 2092252 CCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTT-TATGGTAACAA 2092194 Query 72414 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 72473 ||||||| | |||||||| |||||| |||| ||||| || || | || ||||| || || Sbjct 2092193 CATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAAT 2092134 Query 72474 CTGGGAAGCAGCCACTATGGACGAGTGGTTG 72504 |||||||| || || | || ||||||||| Sbjct 2092133 TTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572864641689080