Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq10 167 7e-37
>seq10
Length=2191866
Score = 167 bits (184), Expect = 7e-37
Identities = 200/269 (74%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 18723 TTTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACT 18782
||||||||| ||| | || || || ||||| ||||| ||||| ||||| || | |
Sbjct 2092373 TTTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAAT 2092314
Query 18783 GATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || ||||| ||| | || || || || || || || || ||||| ||||| |
Sbjct 2092313 CATGATCCCATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
| || |||||||| ||||| || || || || ||| |||| |||||||||||| ||||
Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAA 18961
||||||| | || || || ||||| | || || ||||| || || ||||||||||
Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135
Query 18962 TTTGGGAAGCTAATTCACTTGATGAATGG 18990
||||||||||| ||| || ||||| |||
Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141146703146358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |