Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq10 206 3e-48 >seq10 Length=2191866 Score = 206 bits (228), Expect = 3e-48 Identities = 212/272 (78%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 157676 TTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTG 157735 || || |||||| | || ||||| | ||||| | || | ||||||||||||||| | Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313 Query 157736 ATGATTCCTACGT-TGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 ||||| || | || | ||| ||||||| ||| || || ||| |||| ||| ||||||||| Sbjct 2092312 ATGATCCC-ATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || ||||| || || || || ||||||||| | ||||| || | |||||||||| Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 |||||||| | ||||| |||||||| | ||| ||||| ||||| || || |||||||| | Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTG 157945 | |||||||| || ||||| || |||||| || Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573015039337200