Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq10 190 3e-43 >seq10 Length=2191866 Score = 190 bits (210), Expect = 3e-43 Identities = 210/277 (76%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 174459 TGGGATCAGTTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTC 174518 |||| || |||||| ||| |||| ||||| | || || |||||| ||||||||||| Sbjct 2092381 TGGGCTCGTTTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTC 2092322 Query 174519 GGTGTTCTAATGATTCC-TACATTGTTAGCCGCAACTGTATGTTTCATTATCGCTTTCGT 174577 ||||| | ||||| || | || ||| | ||||| | || || ||||||||| | Sbjct 2092321 GGTGTAATCATGATCCCATGTCTTCTTA-CTGCAACATCAGTATTTATCATCGCTTTCAT 2092263 Query 174578 GGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTA 174637 | |||||| ||||| |||||||| || || ||||||||||| | ||||| || | || Sbjct 2092262 CGCTGCTCCGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTA 2092203 Query 174638 TGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTT 174697 ||| |||||||||||| | ||||| |||||||| | ||| ||||| ||||| || || || Sbjct 2092202 TGGTAACAACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTT 2092143 Query 174698 CTACCCAATCTGGGAAGCAGCCACACTCGACGAATGG 174734 ||||||||| |||||||| || | || || || ||| Sbjct 2092142 CTACCCAATTTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729918185725880