Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq10 190 3e-43
>seq10
Length=2191866
Score = 190 bits (210), Expect = 3e-43
Identities = 210/277 (76%), Gaps = 2/277 (1%)
Strand=Plus/Minus
Query 174459 TGGGATCAGTTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTC 174518
|||| || |||||| ||| |||| ||||| | || || |||||| |||||||||||
Sbjct 2092381 TGGGCTCGTTTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTC 2092322
Query 174519 GGTGTTCTAATGATTCC-TACATTGTTAGCCGCAACTGTATGTTTCATTATCGCTTTCGT 174577
||||| | ||||| || | || ||| | ||||| | || || ||||||||| |
Sbjct 2092321 GGTGTAATCATGATCCCATGTCTTCTTA-CTGCAACATCAGTATTTATCATCGCTTTCAT 2092263
Query 174578 GGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTA 174637
| |||||| ||||| |||||||| || || ||||||||||| | ||||| || | ||
Sbjct 2092262 CGCTGCTCCGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTA 2092203
Query 174638 TGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTT 174697
||| |||||||||||| | ||||| |||||||| | ||| ||||| ||||| || || ||
Sbjct 2092202 TGGTAACAACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTT 2092143
Query 174698 CTACCCAATCTGGGAAGCAGCCACACTCGACGAATGG 174734
||||||||| |||||||| || | || || || |||
Sbjct 2092142 CTACCCAATTTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729918185725880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |