Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_027130.1
Length=172688
Score E
Sequences producing significant alignments: (Bits) Value
seq10 205 1e-47
>seq10
Length=2191866
Score = 205 bits (226), Expect = 1e-47
Identities = 210/272 (77%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 158378 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 158437
||| || |||||| | ||||| || | |||||||| || ||||||||||||| ||| |
Sbjct 2092373 TTTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAAT 2092314
Query 158438 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 158496
||||| ||| ||| | | ||||| ||| || || ||| |||| ||| |||||||||
Sbjct 2092313 CATGATCCCATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255
Query 158497 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 158556
| || || |||||||| || || |||||||| || | ||||| || | ||||||||||
Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195
Query 158557 ACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 158616
|||||||| | ||||| ||||| ||| |||| ||||| || || || || ||||| || |
Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135
Query 158617 TCTGGGAAGCCGCATCACTTGATGAGTGGCTG 158648
| |||||||| || || || ||||||||| ||
Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552464960694080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |