Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq10 165 1e-35
>seq10
Length=2191866
Score = 165 bits (182), Expect = 1e-35
Identities = 203/272 (75%), Gaps = 4/272 (1%)
Strand=Plus/Minus
Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920
|| || |||||| | || || || | || || | || | |||||||||||||| |
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 178921 ATGATTCCTACGT-TGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCAC 178978
||||| || | || | ||| ||||||| ||| || || ||| | |||||| | || || |
Sbjct 2092312 ATGATCCC-ATGTCTTCTTACTGCAAC-ATCAGTATTTATCATCGCTTTCATCGCTGCTC 2092255
Query 178979 CTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACA 179038
| || || || || || || || |||||||| || | ||||| || | ||||| ||||
Sbjct 2092254 CGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACA 2092195
Query 179039 ACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCA 179098
|||||||| | ||||||||||| |||| ||| ||||| || || || || |||||||| |
Sbjct 2092194 ACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAA 2092135
Query 179099 TCTGGGAAGCAGCATCACTCGATGAGTGGCTG 179130
| |||||||| || || || ||||||||| ||
Sbjct 2092134 TTTGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610320055970880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |