Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq35 104 3e-17 >seq35 Length=1396082 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| || ||||| |||||||| || ||||| ||||||||| ||| || ||||| || || Sbjct 1268972 GTGCAGCCCCTCGTCTCGGGAGATGAGTTCGTTTGAGAAGGTTAGGCCGGGCATCAGGCC 1268913 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 || ||||| | ||| |||| ||| || || ||| ||| ||||||||||||||| Sbjct 1268912 GCGTTTCTTGAGCCAGAAAATGCTGCAAAACGAGCCGCTGAAAAAGATACCCTCCACAGC 1268853 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGC 122821 ||| || || | || || || | |||||||| Sbjct 1268852 CGCGAAGGCTACCAGCCGCTCCGGGAAGGAGC 1268821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628022179149600