Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq8 113 5e-20
seq35 91.5 2e-13
>seq8
Length=2307048
Score = 113 bits (124), Expect = 5e-20
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583
|| || ||||| |||||||| || ||||| | |||||| | || || || || |||
Sbjct 1093013 CGGTCGAAGCGGCCTGGACGCAGCAGCGCCTGATCAAGCACGTCGGGTCGGTTGGTGGCG 1093072
Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643
|| | |||| || ||| || | ||||| || ||||| || |||| ||| ||||||
Sbjct 1093073 GCCAGCACAATAACACCCGTGTTGCCCTCAAAGCCGTCCATTTCCGTCAGAAGCTGGTTA 1093132
Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 9701
|| || || || || |||||||| || | || ||| || || | || || ||||
Sbjct 1093133 ATGGTCTGCTCGCGCTCATCATT-GCCGCCAC-CCATGCCGGCGCCACGCTGGCGACCCA 1093190
Query 9702 CGGCATCAATCTCATCAATGAAGACGATGCATGGT 9736
| |||||||||||||||||||||| |||||| |||
Sbjct 1093191 CAGCATCAATCTCATCAATGAAGATGATGCAGGGT 1093225
>seq35
Length=1396082
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854
||||| | ||||| || | || || ||| ||| ||||||||||| ||| || ||
Sbjct 1268823 TCCTTCCCGGAGCGGCTGGTAGCCTTCGCGGCTGTGGAGGGTATCTTTTTCAGCGGCTCG 1268882
Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
|| ||| |||| ||||||||||| || || || ||||| || || |||||| |||
Sbjct 1268883 TTTTGCAGCATTTTCTGGCTCAAGAAACGCGGCCTGATGCCCGGCCTAACCTTCTCAAAC 1268942
Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|| || ||||| || |||||||| || |||
Sbjct 1268943 GAACTCATCTCCCGAGACGAGGGGCTGCAC 1268972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583251679259240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |