Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 >seq6 Length=2401260 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/141 (77%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 52770 GGCGACAAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGAC-CC 52827 ||||||||||| || || ||||||| || ||||| || ||||| | | | || || Sbjct 2072215 GGCGACAAGTTCGCCTCCCGTCACGGC-CAGAAGGGCACCTGCGG--CATTACCTACACC 2072271 Query 52828 A-GGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 52886 | |||||||||||||||| | ||| || | ||||| ||| ||||| ||||||| ||| Sbjct 2072272 ATGGAGGACATGCCCTTCTCCGCGGAGGGCATTGTGCCGGACATCATCGTCAACCCGCAC 2072331 Query 52887 GCCTTTCCCTCCAGGATGACC 52907 ||| |||||||| | |||||| Sbjct 2072332 GCCATTCCCTCCCGCATGACC 2072352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406304205163092