Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_028955.1
Length=197361
Score E
Sequences producing significant alignments: (Bits) Value
seq10 176 6e-39
seq1 105 8e-18
>seq10
Length=2191866
Score = 176 bits (194), Expect = 6e-39
Identities = 205/277 (74%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 189655 ATGGCCTCAGTTCTGTGAGTGGGTAACATCAACAAACAATAGAATCTATGTTGGTTGGTT 189714
|||| ||| || ||||||||| | || ||||| | || | | || | ||||||||
Sbjct 2092382 ATGGGCTCGTTTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTT 2092323
Query 189715 TGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTGTTGCATTTAT 189774
|||||| ||||||| ||||| | || | ||| || || || | | || || ||
Sbjct 2092322 CGGTGTAATCATGATCCCATGTCTTCTTACTGCAACATCAGTATTTATCATCGCTTTCAT 2092263
Query 189775 TGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTA 189834
|| || || || |||||||| ||||| || | || |||||| ||||||| ||||| ||
Sbjct 2092262 CGCTGCTCCGCCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTA 2092203
Query 189835 TGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTT 189894
||||||||||||||| | ||||||||||| || | || || ||||| || || || ||
Sbjct 2092202 TGGTAACAACATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTT 2092143
Query 189895 CTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGG 189931
||||||||| |||||||| || | |||||||||||
Sbjct 2092142 CTACCCAATTTGGGAAGCTGCTTCTCTAGATGAGTGG 2092106
>seq1
Length=5981844
Score = 105 bits (116), Expect = 8e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 184988 TTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGA 185047
|| |||||||||| |||| | | ||| || |||||||| | ||| | ||||| ||
Sbjct 5794312 TTCCCAAAATTTAGCCAAGGTCTAGCACAAGACCCTACAACACGTAGAATATGGTACGGG 5794253
Query 185048 TTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCAA 185107
| |||| || ||||| ||||| || ||||| |||||||||||| || | ||||||
Sbjct 5794252 CTTGCAATGGCTCATGATTTTGAAAGCCATGATGGTATGACAGAAGAAAATCTTTATCAA 5794193
Query 185108 AAATTATTTGCTACACACTTTGGTCA 185133
|| |||||||| |||||||||||||
Sbjct 5794192 AAGATATTTGCTTCACACTTTGGTCA 5794167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631417326057160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |