Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= NC_029098.1 Length=133531 Score E Sequences producing significant alignments: (Bits) Value seq53 84.2 2e-11 >seq53 Length=954740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 21593 CTGGTGTGAGCACAAGCCATCTATCACTGTTTCTGTAAAGGAGCATGAGTGGATGGAAGT 21652 |||||| || |||||||| ||||||||||| |||| ||| ||||||||||| || Sbjct 201907 CTGGTGCGAACACAAGCCCTCTATCACTGTGACTGTCCGCGAGGGGGAGTGGATGGAGGT 201966 Query 21653 AGGAGCTTGGGTTTACAAGCACTTCGATGAAGTGTCTGG 21691 || || ||||| ||||| |||||||| ||| |||| || Sbjct 201967 GGGCGCCTGGGTCTACAAACACTTCGACGAACTGTCAGG 202005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427167887058812