Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq6 87.8 1e-12
>seq6
Length=2401260
Score = 87.8 bits (96), Expect = 1e-12
Identities = 106/140 (76%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 53534 GGCGACAAGTTTGCATCCT-TCACGGCGCAAAAGGGGACATGCGGAGCGGTCCTGACTCA 53592
||||||||||| || ||| ||||||| || ||||| || ||||| | | | || |
Sbjct 2072215 GGCGACAAGTTCGCCTCCCGTCACGGC-CAGAAGGGCACCTGCGG--CATTACCTACACC 2072271
Query 53593 --GGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 53650
|||||||||||||||| | ||| || | ||||| ||| ||||| ||||||| |||
Sbjct 2072272 ATGGAGGACATGCCCTTCTCCGCGGAGGGCATTGTGCCGGACATCATCGTCAACCCGCAC 2072331
Query 53651 GCCTTTCCCTCCAGGATGAC 53670
||| |||||||| | |||||
Sbjct 2072332 GCCATTCCCTCCCGCATGAC 2072351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406157007407386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |